Introductory course on using R for data analysis

This course is being run in-person and online at the following times /dates . 

Monday 28th October 2024 13:00 - 16:00 Bartolome House, Seminar Room EG03, or Online

Wednesday 30th October 2024 13:00 - 16:00 Bartolome House, Seminar Room EG03, or Online

Friday 1st November 2024 13:00 - 16:00 301 Glossop Road, Workshop 1 or Online

Please only sign-up to the course if you are available on these dates, or prepared to devote time to review any sessions that you miss

Course on analysing RNA-seq data without any programming or Bioinformatics experience

High-throughput RNA-sequencing is now the standard technique for quantifying transcript abundance in a biological sample of interest. In this course we will describe the processes that take place once you submit a library for RNA sequencing. We will describe the steps involved to go from sequencing counts to a list of genes that show statistically significant differences between your biological conditions of interest. Practical sessions will use the user-friendly Degust interface (https://degust.erc.monash.edu/) to demonstrate tasks such as quality control and assessing differential expression. We will also showcase some web sites you can use for enrichment and pathways analysis

Introductory course on using the command-line for Bioinformatics analysis

This course will introduce you to using the command-line to process NGS data (RNA-seq in particular), and the concept of a reproducible workflow

We will be assuming some prior experience of using the command-line. 

Please see website for details:-

https://sbc.shef.ac.uk/training/2024_11_27_command-line

Course on analysing RNA-seq data using the R language

Note that this course will take place over three days

Monday 2nd December 13:00 - 16:00 
Wednesday 4th December 13:00 - 16:00
Friday 6th December 13:00 - 16:00

You will need to attend all sessions in order to complete the course.

Some experience of using the R language is required. See our website for further information

https://sbc.shef.ac.uk/training/rna-seq-r-2024-12-02